Changes between Version 1 and Version 2 of BIOS_ReferenceFiles/MetaExonAnnotation-05-06-13


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Timestamp:
Sep 19, 2016 4:48:29 PM (8 years ago)
Author:
jamverlouw
Comment:

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  • BIOS_ReferenceFiles/MetaExonAnnotation-05-06-13

    v1 v2  
    11= Meta-exon annotation 05-06-13 =
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    3 To create the meta-exon annotation we merged all overlapping exons from Ensembl version 71 (see [FgReferenceFiles Transcript annotation section]) using mergeBed tool from BEDTools suite. Overlapping exons belonging to different genes or different strands were also merged into one meta-exon. This was done using the commands described in [wiki:FgReferenceFiles/MetaExonAnnotation_documentation Meta-exon annotation documentation]
     3To create the meta-exon annotation we merged all overlapping exons from Ensembl version 71 (see [BIOS_ReferenceFiles Transcript annotation section]) using mergeBed tool from BEDTools suite. Overlapping exons belonging to different genes or different strands were also merged into one meta-exon. This was done using the commands described in [wiki:BIOS_ReferenceFiles/MetaExonAnnotation_documentation Meta-exon annotation documentation]
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    55Location: `srm://srm.grid.sara.nl/pnfs/grid.sara.nl/data/bbmri.nl/RP3/dzhernakova/meta-exons_v71_cut_sorted_05-06-13.gtf.gz`[[BR]]