Changes between Version 1 and Version 2 of BIOS_start-
- Timestamp:
- Sep 19, 2016 2:26:20 PM (8 years ago)
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BIOS_start-
v1 v2 13 13 14 14 * '''BIOS data accessibility and locations''' 15 * [wiki:FgVirtualMachine Accessing the BIOS Virtual Machine and Grid SRM] 16 * [wiki:FgPreparedData Recommended BIOS datasets for downstream analysis] - One page overview of all BIOS datasets available on the BIOS VM. 17 * [wiki:FgMetadatabase Metadatabase] - Description of the metadatabase where all BIOS metadata are stored. 18 * [wiki:FgDataInfrastructure Grid data infrastructure] - Descriptions and locations regarding data storage on Grid. 19 * [wiki:FgBIOSRutils BIOSRutils package] - Using BIOS data from R. 15 * [wiki:BIOS_bios Getting access to BIOS data] 16 * [wiki:BIOS_VirtualMachine Accessing the BIOS Virtual Machine and Grid SRM] 17 * [wiki:BIOS_PreparedData Recommended BIOS datasets for downstream analysis] - One page overview of all BIOS datasets available on the BIOS VM. 18 * [wiki:BIOS_Metadatabase Metadatabase] - Description of the metadatabase where all BIOS metadata are stored. 19 * [wiki:BIOS_DataInfrastructure Grid data infrastructure] - Descriptions and locations regarding data storage on Grid. 20 * [wiki:BIOS_BIOSRutils BIOSRutils package] - Using BIOS data from R. 20 21 21 22 * '''Infrastructure and data on Groningen Cluster''' 22 * [wiki: FgUMCGFileStructure UMCG file structure] - Descriptions and locations regarding computation resources and project datasets on the Groningen Cluster.23 * [wiki:BIOS_UMCGFileStructure UMCG file structure] - Descriptions and locations regarding computation resources and project datasets on the Groningen Cluster. 23 24 24 25 25 26 * '''Main BIOS Papers''' 26 * [wiki: FgFirstPaper First eQTL paper] - 'Hypothesis-free identification of modulators of genetic risk factors' (in revision at Nature Genetics http://biorxiv.org/content/early/2015/11/30/033217)27 * [wiki: FgFirstmeQTLPaper First meQTL paper] - 'Disease variants alter transcription factor levels and methylation of their binding sites' (in revision at Nature Genetics, http://biorxiv.org/content/early/2015/12/01/033084.1)27 * [wiki:BIOS_FirstPaper First eQTL paper] - 'Hypothesis-free identification of modulators of genetic risk factors' (in revision at Nature Genetics http://biorxiv.org/content/early/2015/11/30/033217) 28 * [wiki:BIOS_FirstmeQTLPaper First meQTL paper] - 'Disease variants alter transcription factor levels and methylation of their binding sites' (in revision at Nature Genetics, http://biorxiv.org/content/early/2015/12/01/033084.1) 28 29 29 30 * '''Organisation''' 30 * [wiki: FgWiki Using this wiki] - Notes on editing and structuring our wiki pages.31 * [wiki: FgMeetingMinutes Meeting minutes] - Minutes of our meetings.32 * [wiki: FgPresentations Presentations and Materials] - Presentations of the project plus templates, logos.31 * [wiki:BIOS_Wiki Using this wiki] - Notes on editing and structuring our wiki pages. 32 * [wiki:BIOS_MeetingMinutes Meeting minutes] - Minutes of our meetings. 33 * [wiki:BIOS_Presentations Presentations and Materials] - Presentations of the project plus templates, logos. 33 34 34 * '''[wiki: FgPrivate Private] '''35 * '''[wiki:BIOS_Private Private] '''