Changes between Version 46 and Version 47 of BigCompute

Timestamp:

Dec 23, 2010 12:42:07 PM (14 years ago)

Author:

Barbera van Schaik

Comment:

--

BigCompute

@@ -127 +127 @@
 * 20-12-2010 17:48 [https://hangplek.nikhef.nl:443/workflows/workflow-ICmgZF/html/workflow-ICmgZF.html done] - elapsed time 9165 s
 
-
 '''Gvnl pipeline on remaining samples (split, bwa, merge, coverage-per-base, picard-qc, mark-duplicates, re-align) Start: 20-12-2010 18:50'''
 || '''Lane''' || '''Progress''' || '''Elapsed time''' ||
@@ -139 +138 @@
 * Note1: Workflow stops after merge-bam. Working on it.
 * Note2: The Dutch grid seems very busy at the moment. That could explain the longer execution times.
+
+*Gvnl pipeline on theoretical reads*
+  * 22-12-2010 19:14 [https://hangplek.nikhef.nl/workflows//workflow-FRErry/html/workflow-FRErry.html done] - elapsed time 38587 s
+  * Workflow does continue after the merge-bam now
+  * To do: implement recalibration step, and a check on all bam files of the split input before the merge step
 
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