wiki:ChipGtDataFormat

Version 1 (modified by Yurii Aulchenko, 12 years ago) (diff)

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WE NEED TO COME UP WITH STANDARD FORMAT WE CAN GET ALL CHIP DATA IN, OR A NUMBER OF FORMATS

Minimally, we need

Meta-info: build, dbSNP version

Info for each genotype

  • SNP dbSNP (rs) ID
  • Individual ID, such that we can link the data in VcfGtDataFormat
  • Genotype (or alleles)
  • some quality score for this genotype
  • ...