Changes between Version 6 and Version 7 of GoNL_Immunochip_Data_Preparation
- Timestamp:
- Apr 21, 2011 5:28:51 PM (14 years ago)
Legend:
- Unmodified
- Added
- Removed
- Modified
-
GoNL_Immunochip_Data_Preparation
v6 v7 56 56 1. Remove all SNPs that are not present in the new reference VCF file (using plink --extract) 57 57 1. Use the liftover VCF as an input to the ''liftover-bim.pl'' tool . 58 59 == Downloads == 60 All tools developed inhouse at UMCG are available here: [[http://www.bbmriwiki.nl/svn/ped_to_vcf]]