Changes between Version 19 and Version 20 of ProjectOverview


Ignore:
Timestamp:
Sep 24, 2010 4:36:23 PM (14 years ago)
Author:
Yurii Aulchenko
Comment:

typos fix

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  • ProjectOverview

    v19 v20  
    3030 * __GWAS data release server__– database and user interfaces to manage and query GWAS data, in particular to create GWAS (control cohort imputation) data releases.
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    32  *  __GWAS CQ and imputation protocols__ – harmonization and enrichment of tools and pipelines to verify and clean GWAS data sets and produce data sets ready for analysis by the researcher.
     32 *  __GWAS QC and imputation protocols__ – harmonization and enrichment of tools and pipelines to verify and clean GWAS data sets and produce data sets ready for analysis by the researcher.
    3333
    3434 * __GWAS data analysis __– a catalog of established protocols and bioinformatic pipeline implementations thereof for GWAS analysis.
     
    6262 * __Participating experts will host programmers and scientific staff to pilot the planned tools and pipelines__ in close support to (their) BBMRI-NL complementation and rainbow projects. These bioinformaticians will be organized in themed working groups as described in appendix 1. Each working group will have a lead programmer that is part of the central engineering team. All members will meet monthly and will have weekly Skype meetings.
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    64  * __This project is strongly linked with leading international sister projects to avoid duplicated efforts __and efficiently achieve these aims by having project members participating in, or staying at, institutes like European Bioinformatics Institute (1KG, EGA, !ArrayExpress), Netherlands Bioinformatics Center (NGS, eScience, CWA), projects like EU-GEN2PHEN, EU-BIOSHARE, OMII-UK, ESFRI/ELIXIR, Parelsnoer, Mondriaan, CTMM, TIFN, NPC, NMC, P3G, Human Variome Project and open source collaborations like !ObiBa, MOLGENIS/XGAP, ABEL and Concept Web Alliance.
     64 * __This project is strongly linked with leading international sister projects to avoid duplicated efforts __and efficiently achieve these aims by having project members participating in, or staying at, institutes like European Bioinformatics Institute (1KG, EGA, !ArrayExpress), Netherlands Bioinformatics Center (NGS, eScience, CWA), projects like EU-GEN2PHEN, EU-BIOSHARE, OMII-UK, ESFRI/ELIXIR, Parelsnoer, Mondriaan, CTMM, TIFN, NPC, NMC, P3G, Human Variome Project and open source collaborations like !ObiBa, MOLGENIS/XGAP, *ABEL and Concept Web Alliance.
    6565=== Model driven software ===
    6666Flexible model driven software development as described in Swertz & Jansen (2007) has proven to be an efficient method to rapidly produce harmonized software infrastructures for life scientists while sharing the best models, software and tools notwithstanding large variation in research aims. This project will build and extend upon open source implementations of these methods such as MOLGENIS and Galaxy focusing on: