Changes between Version 1 and Version 2 of SchematicOverview


Ignore:
Timestamp:
Sep 13, 2010 12:26:39 AM (14 years ago)
Author:
Morris Swertz
Comment:

--

Legend:

Unmodified
Added
Removed
Modified

  • SchematicOverview

    v1 v2  
    11= Schematic overview of BBMRI/GvNL pipelines =
     2
     3Input:
     4 * Raw read data from BGI 12x (FASTQ)
     5 * Called variants from BGI (VCF)
     6 * Immunochip data
     7
    28
    39{{{
    … …  
    713FASTQ->"de novo variant discovery and verification"
    814BGI->VCF->"Chip QC"->"Qced Genotypes"
     15ImmunoChip->"Chip QC"
    916VCF->"Mendelian QC"->"Qced Genotypes"
    1017"Qced Genotypes"->"Call improvement and phasing"->"Improved and phased genotypes"->Imputations
    … …  
    1522}
    1623}}}
     24}}}