Changes between Version 26 and Version 27 of SnpAnnotationPipeline


Ignore:
Timestamp:
Jan 5, 2011 12:24:32 PM (14 years ago)
Author:
a.kanterakis
Comment:

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  • SnpAnnotationPipeline

    v26 v27  
    521521    * --verbose True/False (Default: True)
    522522    * There are additional options for GeneOntology Annoatation and AlleleFrequency from VCF files under development.
     523 * Extra annotation files have been generated in GFF3 format to be used with the customAnnotation parameter:
     524    * /data/home/data/alex/ANNOVAR/annotated/sequence0605_41.index_hg18.snps.filtered.vcf.sequence0605_41.index_hg18.snps.filtered.vcf.AlleleFrequency_AlleleFrequecy.hg18_gff3
     525    * /data/home/data/alex/ANNOVAR/annotated/sequence0605_41.index_hg18.snps.filtered.vcf.sequence0605_41.index_hg18.snps.filtered.vcf.GO_GeneOntology.hg18_gff3
    523526= Related work =
    524527