Changes between Version 31 and Version 32 of SnpCallingPipeline

Timestamp:

Oct 16, 2010 6:24:17 PM (14 years ago)

Author:

Morris Swertz

Comment:

--

SnpCallingPipeline

@@ -10 +10 @@
 == Simplified Overview ==
 
-This simplified overview hides intermediate sort and indexing steps.
+This simplified overview this schema hides intermediate sort and indexing steps and only shows data inputs/outputs first time they occur.
 
 {{{#!graphviz
@@ -45 +45 @@
                 color=lightgrey;
                 node [style=filled,color=white];
-                "flowcell_lane.aligned.bam" -> Merge -> "sample.aligned.bam" -> "IndelRealigner"-> FixMateInformation
-                "flowcell_lane2.aligned.bam" -> Merge
+                "flowcell_lane.aligned.bam" -> Merge -> "IndelRealigner"-> FixMateInformation
+                "flowcell_lane2.aligned.bam" -> Merge -> "sample.aligned.bam"
                 "flowcell_lane3.aligned.bam" -> Merge
                 FixMateInformation -> IndelGenotyperV2 -> FilterSingleCalls -> UnifiedGenotyper -> Filtration -> VariantEval -> "QC reports"