Changes between Version 48 and Version 49 of SnpCallingPipeline


Ignore:
Timestamp:
Oct 19, 2010 12:49:32 AM (12 years ago)
Author:
Morris Swertz
Comment:

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  • SnpCallingPipeline

    v48 v49  
    44
    55This is the documentation of the BBMRI-NL snp calling pipeline based on the [http://www.broadinstitute.org/gsa/wiki/index.php/The_Genome_Analysis_Toolkit Broad GATK]. It consists of the following three workflows:
    6 * SnpCallingPipeline/ReferencePreparation
    7 * SnpCallingPipeline/AlignmentAndCleaning
    8 * SnpCallingPipeline/VariantCalling
     6* Workflow 1: SnpCallingPipeline/ReferencePreparation
     7* Workflow 2: SnpCallingPipeline/AlignmentAndCleaning
     8* Workflow 3: SnpCallingPipeline/VariantCalling
    99== Schematic Overview ==
    1010