Changes between Version 33 and Version 34 of WikiStart


Ignore:
Timestamp:
Sep 22, 2010 10:30:14 AM (12 years ago)
Author:
Morris Swertz
Comment:

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  • WikiStart

    v33 v34  
    1515   * CoverageAnalysisPipeline - description of the coverage analysis pipeline (AMC?)
    1616   * ChipBasedQcPipeline - description of the chip data comparison QC pipeline (EMC?)
    17    * MendelianQcPipeline - description of the mendelian check pipeline
     17   * MendelianQcPipeline - description of the mendelian check pipeline 
    1818   * DeNovoVariationPipeline - finding de novo variations in the GvNL data (LUMC?)
    19    * TrioAwareVariantDiscoveryPipeline - Trio-aware variant discovery and genotype calling pipeline
     19   * TrioAwareVariantDiscoveryPipeline - Trio-aware variant discovery and genotype calling pipeline (UU?)
    2020  * '''Genotype analysis and imputation (WP2)'''
    21    * TrioAwarePhasingPipeline - phasing the individuals using trio information
    22    * SnpAnnotationPipeline - annotating SNPs with known functional information
     21   * TrioAwarePhasingPipeline - phasing the individuals using trio information (EMC?)
     22   * SnpAnnotationPipeline - annotating SNPs with known functional information (LUMC?,UMCG?)
    2323   * ImputationPipeline - description of the imputation pipeline (VU?,UMCG?)
    2424  * '''Catalogue and search of biobanks (WP3)'''
    2525   * [https://sites.google.com/a/nbiceng.net/hackathonii Connecting biobanks Hackaton] - in collaboration with NBIC
    2626  * '''Genomic biobank IT infrastructure (WP4)'''
    27    * DataManagement - how we use MOLGENIS to track/trace data and tools
    28    * WorkflowTools - how to configure, manage and run pipelines
    29    * BigStorage - how we store the NGS and GWAS data
    30    * BigCompute - how we will enable the pipelines on grids and clusters
     27   * DataManagement - how we use MOLGENIS to track/trace data and tools (UMCG)
     28   * WorkflowTools - how to configure, manage and run pipelines (UMCG)
     29   * BigStorage - how we store the NGS and GWAS data (UMCG,SARA,CIT)
     30   * BigCompute - how we will enable the pipelines on grids and clusters (UMCG,SARA,CIT)
    3131
    3232*Work organization based on regenboog project. Clearly there is much connection between all work.