Changes between Version 34 and Version 35 of WikiStart


Ignore:
Timestamp:
Sep 23, 2010 11:01:22 PM (12 years ago)
Author:
Morris Swertz
Comment:

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  • WikiStart

    v34 v35  
    1212 * '''Sequence analysis (WP1)'''
    1313   * SchematicOverview - overview of the pipelines needed
    14    * SnpCallingPipeline - description of the variation analysis pipeline (UMCG?)
    15    * CoverageAnalysisPipeline - description of the coverage analysis pipeline (AMC?)
    16    * ChipBasedQcPipeline - description of the chip data comparison QC pipeline (EMC?)
     14   * SnpCallingPipeline - description of the variation analysis pipeline (UMCG)
     15   * CoverageAnalysisPipeline - description of the coverage analysis pipeline (AMC)
     16   * ChipBasedQcPipeline - description of the chip data comparison QC pipeline (EMC)
    1717   * MendelianQcPipeline - description of the mendelian check pipeline
    18    * DeNovoVariationPipeline - finding de novo variations in the GvNL data (LUMC?)
    19    * TrioAwareVariantDiscoveryPipeline - Trio-aware variant discovery and genotype calling pipeline (UU?)
     18   * DeNovoVariationPipeline - finding de novo variations in the GvNL data (LUMC)
     19   * TrioAwareVariantDiscoveryPipeline - Trio-aware variant discovery and genotype calling pipeline (UU)
    2020  * '''Genotype analysis and imputation (WP2)'''
    21    * TrioAwarePhasingPipeline - phasing the individuals using trio information (EMC?)
    22    * SnpAnnotationPipeline - annotating SNPs with known functional information (LUMC?,UMCG?)
    23    * ImputationPipeline - description of the imputation pipeline (VU?,UMCG?)
     21   * TrioAwarePhasingPipeline - phasing the individuals using trio information (EMC)
     22   * SnpAnnotationPipeline - annotating SNPs with known functional information (LUMC,UMCG)
     23   * ImputationPipeline - description of the imputation pipeline (VU,UMCG)
    2424  * '''Catalogue and search of biobanks (WP3)'''
    2525   * [https://sites.google.com/a/nbiceng.net/hackathonii Connecting biobanks Hackaton] - in collaboration with NBIC