Changes between Version 34 and Version 35 of WikiStart

Timestamp:

Sep 23, 2010 11:01:22 PM (14 years ago)

Author:

Morris Swertz

Comment:

--

WikiStart

@@ -12 +12 @@
  * '''Sequence analysis (WP1)'''
    * SchematicOverview - overview of the pipelines needed
-   * SnpCallingPipeline - description of the variation analysis pipeline (UMCG?)
-   * CoverageAnalysisPipeline - description of the coverage analysis pipeline (AMC?)
-   * ChipBasedQcPipeline - description of the chip data comparison QC pipeline (EMC?)
+   * SnpCallingPipeline - description of the variation analysis pipeline (UMCG)
+   * CoverageAnalysisPipeline - description of the coverage analysis pipeline (AMC)
+   * ChipBasedQcPipeline - description of the chip data comparison QC pipeline (EMC)
    * MendelianQcPipeline - description of the mendelian check pipeline 
-   * DeNovoVariationPipeline - finding de novo variations in the GvNL data (LUMC?)
-   * TrioAwareVariantDiscoveryPipeline - Trio-aware variant discovery and genotype calling pipeline (UU?)
+   * DeNovoVariationPipeline - finding de novo variations in the GvNL data (LUMC)
+   * TrioAwareVariantDiscoveryPipeline - Trio-aware variant discovery and genotype calling pipeline (UU)
   * '''Genotype analysis and imputation (WP2)'''
-   * TrioAwarePhasingPipeline - phasing the individuals using trio information (EMC?)
-   * SnpAnnotationPipeline - annotating SNPs with known functional information (LUMC?,UMCG?)
-   * ImputationPipeline - description of the imputation pipeline (VU?,UMCG?)
+   * TrioAwarePhasingPipeline - phasing the individuals using trio information (EMC)
+   * SnpAnnotationPipeline - annotating SNPs with known functional information (LUMC,UMCG)
+   * ImputationPipeline - description of the imputation pipeline (VU,UMCG)
   * '''Catalogue and search of biobanks (WP3)'''
    * [https://sites.google.com/a/nbiceng.net/hackathonii Connecting biobanks Hackaton] - in collaboration with NBIC