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Sep 22, 2016:

3:56 PM BIOS_VirtualMachine edited by Leon Mei

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3:46 PM BIOS_SshKey edited by Leon Mei

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2:04 PM BIOS_VirtualMachine edited by rick

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2:02 PM BIOS_VirtualMachine edited by rick

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2:00 PM BIOS_VirtualMachine edited by rick

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1:32 PM BIOS_VirtualMachine edited by rick

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1:28 PM BIOS_SshKey edited by rick

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1:25 PM BIOS_gui edited by rick

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1:24 PM xx2go.png attached to BIOS_gui by rick

11:54 AM BIOS_gui edited by rick

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11:53 AM x2go.2.png attached to BIOS_gui by rick

11:52 AM BIOS_gui edited by rick

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11:51 AM Screenshot from 2016-09-22 11:51:06.png attached to BIOS_gui by rick

11:49 AM MobaXterm.png attached to BIOS_gui by rick

11:49 AM x2go.png attached to BIOS_gui by rick

11:47 AM BIOS_VirtualMachine edited by rick

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11:47 AM BIOS_VirtualMachine edited by rick

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11:44 AM BIOS_gui edited by rick

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11:43 AM BIOS_gui edited by rick

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11:42 AM BIOS_gui edited by rick

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11:40 AM BIOS_VirtualMachine edited by rick

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11:39 AM BIOS_gui created by rick

11:39 AM BIOS_VirtualMachine edited by rick

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11:37 AM BIOS_SshKey edited by rick

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Sep 20, 2016:

4:01 PM BIOS_start- edited by rick

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4:00 PM BIOS_start- edited by rick

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4:00 PM BIOS_ackn edited by rick

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3:59 PM BIOS_ackn edited by rick

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3:57 PM BIOS_ackn created by rick

3:57 PM BIOS_start- edited by rick

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3:43 PM BIOS_SshKey edited by jamverlouw

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1:45 PM BIOS_Wiki edited by jamverlouw

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1:45 PM BIOS_Wiki edited by jamverlouw

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1:44 PM BIOS_Wiki edited by jamverlouw

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1:07 PM BIOS_Wiki/BIOS_exon created by jamverlouw

1:05 PM RP3_pheno_V02.txt attached to BIOS_Phenotype by jamverlouw

1:05 PM RP3_pheno_V01_plots.pdf attached to BIOS_Phenotype by jamverlouw

1:05 PM RP3_pheno_V01.txt attached to BIOS_Phenotype by jamverlouw

1:03 PM BIOS_Phenotype created by jamverlouw

12:44 PM BIOS_start- edited by rick

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12:40 PM BIOS_PreparedData edited by rick

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12:34 PM BIOS_start- edited by rick

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12:32 PM BIOS_bios edited by rick

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12:29 PM BIOS_Wiki edited by rick

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Sep 19, 2016:

5:21 PM pooling_qc_data_131125_edPB.xlsx attached to BIOS_SampleBlacklist by jamverlouw

5:21 PM pooling_qc_data_131125.xlsx attached to BIOS_SampleBlacklist by jamverlouw

5:21 PM genotype_concordance_heterozygosity_rate_imputed_RS_CODAM_LLS.xlsx attached to BIOS_SampleBlacklist by jamverlouw

5:21 PM gender_analysis.r attached to BIOS_SampleBlacklist by jamverlouw

5:21 PM gender_analysis.2.r attached to BIOS_SampleBlacklist by jamverlouw

5:21 PM blacklist_QC.txt attached to BIOS_SampleBlacklist by jamverlouw

5:21 PM blacklist_genotypeCalling_run1.txt attached to BIOS_SampleBlacklist by jamverlouw

5:21 PM blacklist_20140117.txt attached to BIOS_SampleBlacklist by jamverlouw

5:16 PM BIOS_SampleBlacklist edited by jamverlouw

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5:15 PM BIOS_SampleBlacklist created by jamverlouw

5:13 PM BIOS_SampleBlacklist2 edited by jamverlouw

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5:13 PM run1_stats_pc_correlations.rar attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:12 PM run1_qc_stats_for_samples_below_30M_past_filter_reads.txt attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:12 PM PCA_Lude_5nov13.txt attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:12 PM Outliers_pca_2188_samples.pdf attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:12 PM merged_qc_stats_2188_samples.xlsx attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:12 PM important_summary_stats_run_1.pdf attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:12 PM important_summary_stats_run_1.2.pdf attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:12 PM factorloadings.txt attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:11 PM correlations_of_qc_factors_to_pc_Lude_2188_samples.xlsx attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:11 PM correlations_of_qc_factors_to_pc_Lude.xlsx attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:11 PM correlations_of_qc_factors_to_pc_Lude.2.xlsx attached to BIOS_QualityControl/BIOS_QualityControlRun1 by jamverlouw

5:04 PM BIOS_QualityControl/BIOS_QualityControlRun1 created by jamverlouw

5:04 PM BIOS_SampleBlacklist2 edited by jamverlouw

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5:03 PM BIOS_SampleBlacklist2 created by jamverlouw

5:02 PM BIOS_RnaSeq created by jamverlouw

5:00 PM pipelineDesignRP3_20141030.odp attached to BIOS_Pipeline by jamverlouw

5:00 PM BIOS_Pipeline/ReplicationTest created by jamverlouw

4:59 PM RNA seq QC 5-2-2016.pdf attached to BIOS_Pipeline/Methodology by jamverlouw

4:59 PM pipelineDesignV1404.png attached to BIOS_Pipeline/Methodology by jamverlouw

4:59 PM pipelineDesignRP3_20141030.odp attached to BIOS_Pipeline/Methodology by jamverlouw

4:59 PM pipelineDesignRP3_20130711.pdf attached to BIOS_Pipeline/Methodology by jamverlouw

4:59 PM base_count_example.png attached to BIOS_Pipeline/Methodology by jamverlouw

4:58 PM BIOS_Pipeline/Methodology created by jamverlouw

4:58 PM BIOS_Pipeline/v2.1.0 created by jamverlouw

4:57 PM BIOS_Pipeline/v1.0.4 created by jamverlouw

4:57 PM BIOS_Pipeline/6d401ed created by jamverlouw

4:56 PM BIOS_Pipeline/7ea6b13 created by jamverlouw

4:56 PM BIOS_Pipeline/5ddcae7 created by jamverlouw

4:55 PM BIOS_Pipeline/pipeline_todo created by jamverlouw

4:54 PM BIOS_Pipeline created by jamverlouw

4:48 PM BIOS_ReferenceFiles/MetaExonAnnotation_documentation created by jamverlouw

4:48 PM BIOS_ReferenceFiles/MetaExonAnnotation-05-06-13 edited by jamverlouw

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4:47 PM meta-exons_v71_cut_sorted_05-06-13.unmerged.bed attached to BIOS_ReferenceFiles/MetaExonAnnotation-05-06-13 by jamverlouw

4:47 PM BIOS_ReferenceFiles/MetaExonAnnotation-05-06-13 created by jamverlouw

4:46 PM BIOS_ReferenceFiles created by jamverlouw

4:44 PM BIOS_PreparedData edited by jamverlouw

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4:12 PM BIOS_StorageInTheCloud created by jamverlouw

4:10 PM BIOS_VirtualMachine edited by jamverlouw

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4:09 PM BIOS_ConnectTroubleshooting created by jamverlouw

4:01 PM BIOS_SshKey edited by jamverlouw

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3:59 PM puttygengenerated2.png attached to BIOS_SshKey by jamverlouw

3:59 PM x2go.png attached to BIOS_SshKey by jamverlouw

3:59 PM putty2.png attached to BIOS_SshKey by jamverlouw

3:58 PM putty1.png attached to BIOS_SshKey by jamverlouw

3:58 PM MobaXterm.png attached to BIOS_SshKey by jamverlouw

3:57 PM BIOS_SshKey created by jamverlouw

3:56 PM BIOS_VirtualMachine edited by jamverlouw

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3:55 PM BIOS_start- edited by jamverlouw

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3:50 PM BIOS_start- edited by rick

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3:43 PM BIOS_start- edited by rick

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3:42 PM BIOS_start- edited by rick

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3:42 PM BIOS_start- edited by rick

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3:40 PM BIOS_RNA-seq_Supp-Methods-Freeze1 created by rick

3:40 PM BIOS_start- edited by rick

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3:37 PM Zhernakova_et_al_Online_Methods_revision2.docx attached to BIOS_start- by rick

RNA seq Freeze 1 Methods and QC

3:33 PM BIOS_start- edited by rick

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3:33 PM BIOS_start- edited by rick

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3:30 PM BIOS_start- edited by rick

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3:23 PM BIOS_start- edited by rick

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3:20 PM BIOS_start- edited by rick

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3:15 PM BIOS_start- edited by rick

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3:15 PM BIOS_start- edited by rick

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3:14 PM BIOS_team created by rick

3:14 PM BIOS_start- edited by rick

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3:14 PM BIOS_start- edited by rick

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3:12 PM BIOS_bios edited by rick

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3:12 PM BIOS_bios edited by rick

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2:26 PM BIOS_start- edited by rick

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2:12 PM BIOS_bios created by rick

1:34 PM BIOS_Wiki edited by rick

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1:32 PM BIOS_Wiki created by rick

1:31 PM BIOS_FirstmeQTLPaper created by rick

1:15 PM BIOS_FirstPaper created by rick

1:14 PM bios_structure_ascii.txt attached to BIOS_UMCGFileStructure by rick

1:12 PM BIOS_UMCGFileStructure created by rick

1:06 PM subjectsbiobanks-1.png attached to BIOS_BIOSRutils by rick

1:06 PM subjectsagedist-1.png attached to BIOS_BIOSRutils by rick

1:05 PM methylaidoutliersum-1.png attached to BIOS_BIOSRutils by rick

1:05 PM measurementlactate-1.png attached to BIOS_BIOSRutils by rick

1:04 PM BIOS_BIOSRutils created by rick

1:00 PM BIOS_DataInfrastructure created by rick

12:57 PM BIOS_Metadatabase created by rick

12:53 PM get_RNA_seq_and_covariates.R attached to BIOS_PreparedData by rick

12:50 PM BIOS_PreparedData created by rick

11:59 AM BIOSdataInfrastructure.png attached to BIOS_VirtualMachine by rick

11:57 AM BIOS_VirtualMachine created by rick

Sep 16, 2016:

2:20 PM WikiStart edited by rick

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2:13 PM BIOS_start- created by rick

2:12 PM WikiStart edited by rick

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1:52 PM Gonltest created by rick

Sep 15, 2016:

10:37 AM WikiStart edited by rick

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10:37 AM WikiStart edited by rick

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10:36 AM WikiStart edited by rick

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